Simple Job

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Latest revision as of 09:47, 27 May 2012

This is simple single job submitting example. Executing script will list first and second argument.Arguments are fileA and fileB. For demonstration use attached file.

single.tgz

Single2.tgz

Single_advanced.tgz

1.Extract file with:

 [ngrkic@ui ~]$ tar xvzf single.tgz

2.Enter directory single with:

 [ngrkic@ui ~]$ cd single

3.List directory:

 [ngrkic@ui single]$ ll

-rw-rw-r--  1 ngrkic ngrkic  23 Sep 30 23:43 fileA
-rw-rw-r--  1 ngrkic ngrkic  23 Sep 30 23:43 fileB
-rw-rw-r--  1 ngrkic ngrkic 184 Oct  1 13:00 single.jdl
-rw-rw-r--  1 ngrkic ngrkic  63 Sep 30 23:42 test.sh

This is content of files

[ngrkic@ui single]$ cat fileA 

This is first file....

[ngrkic@ui single]$ cat fileB

This is second file...

[ngrkic@ui single]$ cat test.sh 
#!/bin/sh
echo "First file:"
cat $1
echo "Second file:"
cat $2

[ngrkic@ui single]$ cat single.jdl 

Executable = "test.sh";
Arguments = "fileA  fileB";
StdOutput = "std.out";
StdError = "std.err";
InputSandbox = {"test.sh", "fileA", "fileB"};
OutputSandbox = {"std.out", "std.err"};

4.Creating VOMS proxy:

[ngrkic@ui single]$ voms-proxy-init -voms aegis

Cannot find file or dir: /home/ngrkic/.glite/vomses
Enter GRID pass phrase:
Your identity: /C=RS/O=AEGIS/OU=Institute of Physics Belgrade/CN=Nikola Grkic
Creating temporary proxy ......................... Done
Contacting  voms.ipb.ac.rs:15001 [/C=RS/O=AEGIS/OU=Institute of Physics Belgrade/CN=host/voms.ipb.ac.rs] "aegis" Done
Creating proxy ..................................................... Done
Your proxy is valid until Fri Oct  2 01:11:00 2009 </code>

5.Submiting single job:

[ngrkic@ui single]$ glite-wms-job-submit -a single.jdl

Connecting to the service https://wms-aegis.ipb.ac.rs:7443/glite_wms_wmproxy_server

====================== glite-wms-job-submit Success ======================

The job has been successfully submitted to the WMProxy 
Your job identifier is:

https://wms-aegis.ipb.ac.rs:9000/aV8X3jGTiR0cRSsfxhr3nA

==========================================================================

Copy the job ID.Job is running now, and it should finish in few moments...

6.Requesting Job status:

[ngrkic@ui single]$ glite-wms-job-status https://wms-aegis.ipb.ac.rs:9000/aV8X3jGTiR0cRSsfxhr3nA


*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://wms-aegis.ipb.ac.rs:9000/aV8X3jGTiR0cRSsfxhr3nA
Current Status:     Done (Success)
Logged Reason(s):
   - 
   - Job terminated successfully
Exit code:          0
Status Reason:      Job terminated successfully
Destination:        grid01.rcub.bg.ac.rs:2119/jobmanager-pbs-aegis
Submitted:          Thu Oct  1 13:38:10 2009 CEST
*************************************************************

7.Requesting Job output:

[ngrkic@ui single]$ glite-wms-job-output --dir /home/ngrkic/test https://wms-aegis.ipb.ac.rs:9000/aV8X3jGTiR0cRSsfxhr3nA

================================================================================

			JOB GET OUTPUT OUTCOME

Output sandbox files for the job:
https://wms-aegis.ipb.ac.rs:9000/aV8X3jGTiR0cRSsfxhr3nA
have been successfully retrieved and stored in the directory:
/home/ngrkic/test

================================================================================

8.Go to test directory and see output with commands:

[ngrkic@ui single]$ cd 
[ngrkic@ui ~]$ cd test
[ngrkic@ui ~]$ cat std.out
First file:
This is first file....
Second file:
This is second file...